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2015

2015
 

Akanno, E.C., Plastow, G., Fitzsimmons, C., Miller, S.P., Baron, V., Ominski, K., Basarab, J.A. (2015) Genome-wide association for heifer reproduction and postpartum performance traits in beef cattle. Genome 58: 549-557. IF 1.356 Citations 1.

 

Andersson, L., Archibald, A.L., Bottema, C.D., Brauning, R., Burgess, S.C., Burt, D.W., Casas, E., Cheng, H.H., Clarke, L., Couldrey, C., Dalrymple, B.P., Elsik, C.G., Foissac, S., Giuffra, E., Groenen, M.A., Hayes, B.J., Huang, L.S., Khatib, H., Kijas, J.W., Kim, H., Lunney, J.K., McCarthy, F.M., McEwan, J.C., Moore, S., Nanduri, B., Notredame, C., Palti, Y., Plastow, G.S.,Reecy, J.M., Rohrer, G.A., Sarropoulou, E., Schmidt, C.J., Silverstein, J., Tellam, R.L.,Tixier-Boichard, M., Tosser-Klopp, G., Tuggle, C.K., Vilkki, J., White, S.N., Zhao, S., Zhou, H., and The FAANG Consortium (2015) Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project. Genome Biology 16: 57. IF 11.313 Citations 37.

 

Bamdad, F., Sun, X., Guan L.L., Chen, L. (2015) Preparation and characterization of antimicrobial cationized peptides from barley (Hordeum vulgare L.) proteins. Lebensmittel-Wissenschaft und-Technologie 63: 29-36. IF 2.711 Citations 2.

 

Bao, H., Kommadath, A., Liang, G., Sun, X., Arantes, A.S., Tuggle, C.K., Bearson, S.M.D., Plastow, G.S., Stothard, P., Guan, L.L. (2015) Genome-wide whole blood microRNAome and transcriptome analyses revealed miRNA-mRNA regulated host response to foodborne pathogen Salmonella infection in swine. Scientific Reports 5: 12620. IF 5.228 Citations 4.

 

Chen, L., Ekine-Dzivenu, C., Vinsky, M., Basarab, J., Aalhus, J., Dugan, M.E.R., Fitzsimmons, C., Stothard, P., Changxi, L. (2015) Genome-wide association and genomic prediction of breeding values for fatty acid composition in subcutaneous adipose and longissimus lumborum muscle of beef cattle. BMC Genetics 16:135.

Chen, C., Li, C., Schenkel, F. (2015) An alternative computing strategy for genomic prediction using a Bayesian mixture model. Canadian Journal of Animal Science 95: 1-11. IF 0.724 Citations 2.

 

Chen, L., Vinsky, M., Li., C. (2015) Accuracy of predicting genomic breeding values for carcass merit traits in Angus and Charolais beef cattle. Animal Genetics 46: 55-59. IF 1.779 Citations 4.

 

Dorshorst, B., Henegar, C., Liao, X., Sallman Almen, M., Rubin, C.J., Ito, S., Wakamatsu, K., Stothard, P., Van Doormaal, B., Plastow, G., Barsh, G.S., Andersson, L. (2015) Dominant red coat color in Holstein cattle is associated with a missense mutation in the coatomer protein complex, subunit alpha (COPA) gene. PLoS One 10: e0128969. IF 3.54 Citations 4.

 

Guan, Y., Liang, G., Hawken, P.A.R., Malecki, I.A., Cozens, G., Vercoe, P.E., Martin, G.B., Guan, L.L. (2015) Roles of small RNAs in the effects of nutrition on apoptosis and spermatogenesis in the adult testis. Scientific Reports 5: 10372. IF 5.228 Citations 3.

 

Guan, Y., Liang, G., Hawken, P.A.R., Meachem, S., Malecki, I.A., Ham, S., Stewart, T., Guan, L.L., Martin, G.B. (2014) Nutrition affects Sertoli cell function, but not Sertoli cell numbers in sexually mature male sheep. Reproduction, Fertility and Development 28: 1152-1163. IF 2.135 Citations 1.

 

Henderson G, Cox F, Ganesh S, Jonker, A., Young, W., Global Rumen Census Collaborators, Janssen, P.H. (2015) Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range. Scientific Reports 5: 14567. IF 5.228 Citations 40.

 

Jiang J.C., Zhang, Q., Ma, L., Li, J.Y., Wang Z., Liu, J.F. (2015) Joint prediction of multiple quantitative traits using a Bayesian multivariate antedependence model. Heredity 115: 29-36. IF 3.801 Citations 2.

 

Jiao, J.Z., W.Z., Guan, L.L., Tan, Z.L., Han, X.F., Tang, S.X., Zhou, C.S. (2015) Postnatal bacterial succession and functional establishment of hindgut in supplemental feeding and grazing goats. Journal of Animal Science 93: 3528-38. IF 2.014 Citations 1.

 

Kim, E.T., Guan, L.L., Lee, S.J., Lee, S.M., Lee, S.S., Lee, I.D., Lee, S.K., Lee, S.S. (2015) Effects of flavonoid-rich plant extracts on in vitro ruminal methanogenesis, microbial populations and fermentation characteristics. Asian-Australas Journal Animal Science 28: 530-7. IF 0.756 Citations 7.

 

Koltes, J.E., Fritz-Waters, E., Eisley, C.J., Choi, I., Bao, H., Kommadath, A., Serao, N.V., Boddicker, N.J., Abrams, S.M., Schroyen, M., Loyd, H., Tuggle, C.K., Plastow, G.S., Guan, L., Stothard, P., Lunney, J.K., Liu, P., Carpenter, S., Rowland, R.R., Dekkers, J.C., Reecy, J.M. (2015) Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection. BMC Genomics 16: 412. IF 3.867 Citations 13.

 

Ladinig, A., Ashley, C., Detmer, S.E., Wilkinson, J.M., Lunney, J.K., Plastow, G., Harding, J.C.S. (2015) Maternal and fetal predictors of fetal viral load and death in third trimester, type 2 porcine reproductive and respiratory syndrome virus infected pregnant gilts. Veterinary Research 46: 107. IF 2.928 Citations 7.

 

Lee, S.J., Kim, D.H., Guan, L.L., Ahn, S.K., Cho, K.W., Lee, S.S. (2015) Effect of Medicinal Plant By-products Supplementation to Total Mixed Ration on Growth Performance, Carcass Characteristics and Economic Efficacy in the Late Fattening Period of Hanwoo Steers. Asian-Australasian Journal of Animal Sciences 28:1729-1735. IF 0.756 Citations 1.

 

Lee, S.M., Guan, L.L., Eun, J.S., Kim, C.H., Lee, S.J., Kim, E.T., Lee, S.S. (2015) The effect of anaerobic fungal inoculation on the fermentation characteristics of rice straw silages. Journal of Applied Microbiology 118: 565-73. IF 2.156 Citations 2.

 

Lewis, E.D., Zhao, Y.-Y., Richard, C., Bruce, H.L., Jacobs, R.L., Field, C.J., Curtis, J.M. (2015) Measurement of the abundance of choline and the distribution of choline-containing moieties in meat. International Journal of Food Science and Nutrition 66: 743-748. IF 1.451 Citations 1.

 

Liang, G., Malmuthuge, N., Guan, L.L., Griebel, P.J. (2015) Model systems to analyze the role of miRNAs and commensal microflora in bovine mucosal immune system development. Molecular Immunology 66: 57-67. IF 3.375 Citations 2.

 

López-Campos, Ó., Aalhus, J.L., Prieto, N., Larsen, I. L., Juárez, M., Basarab, J.A. (2015) Chronological vs. physiological age indicators in beef cattle: Effects of the production system and growth promotants. Meat Science 99: 146. IF 2.801 Citations 1.

 

Lu, Y., Vandehaar, M.J., Spurlock, D.M., Weigel, K.A., Armentano, L.E., Staples, C. R., Connor, E.E., Wang, Z., Bello, N.M., Tempelman, R.J. (2015) An alternative approach to modelling genetic merit of feed efficiency in dairy cattle. Journal of Dairy Science 98: 6535-6551. IF 2.408 Citations 5.

 

McAllister, T.A., Meale, S.J., Valle, E., Guan, L.L., Zhou, M., Kelly, W.J., Henderson, G., Attwood, G.T., Janssen, P.H. (2015) Ruminant Nutrition Symposium: Use of genomics and transcriptomics to identify strategies to lower ruminal methanogenesis. Journal of Animal Science 93: 1431-49. IF 2.014 Citations 8.

 

Mahmood, S., Basarab, J., Dixon, W., Bruce, H. L. (2015) Can potential for dark cutting be predicted by phenotype? I. Relationships between sex, carcass characteristics and the incidence of dark cutting beef. Canadian Journal of Animal Science 99: 151. IF 0.724 Citations 1.

 

Majumder, K., Liang, G., Chen, Y., Guan, L.L., Davidge, S.T., Wu, J. (2015) Egg ovotransferrin derived ACE inhibitory peptide IRW increases ACE2 but decreases pro-inflammatory genes expression in mesenteric artery of spontaneously hypertensive rats. Molecular Nutrition & Food Research 59: 1735-1744. IF 4.551 Citations 5.

 

Malmuthuge, N., Chen, Y., Liang, G., Goonewardene, L.A., Guan, L.L. (2015) Heat-treated colostrum feeding promotes beneficial bacteria colonization in the small intestine of neonatal calves. Journal of Dairy Science 98: 8044-53. IF 2.408 Citations 7.

 

Malmuthuge, N., Grebiel, J.G., Guan, L.L. (2015) The gut microbiome and its potential role in the development and function of newborn calf gastrointestinal tract. Frontiers Veterinary Science 2: 36. IF ? Citations 5.

 

Manafiazar, G., Basarab, J.A., Baron, V.S., McKeown, L., Doce, R.R., Swift, M., Undi, M., Wittenberg, K., Ominski, K. (2015) Effect of post-weaning residual feed intake classification on grazed grass intake and performance in pregnant beef heifers. Canadian Journal of Animal Science 95: 369-381. IF 0.724 Citations 3.

 

Meale, S.J., Chaves, A.V., He, M.L., Guan, L.L., McAllister, T.A. (2015) Effects of various dietary lipid additives on lamb performance, carcass characteristics, adipose tissue fatty acid composition, and wool characteristics. Journal Animal Science 93: 3110-20. IF 2.014 Citations 3.

 

Miar, Y., Plastow, G., Wang, Z. (2015) Genomic selection, a new era for pork quality improvement. Springer Science Reviews 3: 27-37. IF n/a Citations 0.

 

Miller, J.M., Moore, S.S., Stothard, P., Liao, X., Coltman, D.W. (2015) Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis). BMC Genomics 16: 397. IF 3.867 Citations 2.

 

Munns, K.D., Selinger, L.B., Stanford, K., Guan, L.L., Callaway, T.R., McAllister, T.A. (2015) Perspectives on super-shedding of Escherichia coli O157:H7 by cattle. Foodborne Pathogens and Disease 12: 89-103. IF 2.27 Citations 5.

 

Paradis, F., Yue, S., Grant, J.R., Stothard, P., Basarab, J., Fitzsimmons, C. (2015) Transcriptomic analysis by RNA-sequencing reveals that hepatic interferon-induced genes may be associated with feed efficiency in beef heifers. Journal of Animal Science 93: 3331-3341. IF 2.014 Citations 5.

 

Peters, D.L., Lynch, K.H., Stothard, P., Dennis, J.J. (2015) The isolation and characterization of two Stenotrophomonas maltophilia bacteriophages capable of cross-taxonomic order infectivity. BMC Genomics 16: 664. IF 3.867 Citations 2.

 

Pickering, N.K., Oddy, V.H., Basarab, J., Cammack, K., Hayes, B., Hegarty, R.S., Lassen, J., McEwan, J.C., Miller, S., Pinares-Patiño, C.S., de Haas, Y. (2015) Animal board invited review: genetic possibilities to reduce enteric methane emissions from ruminants. Animal 9: 1431–1440. IF ? Citations 14.

 

Pourabedin, M., Guan, L.L., Xin, Z. (2015) Xylo-oligosaccharides and virginiamycin differentially modulate gut microbial composition in chickens. Microbiome 3: 15. IF ? Citations 5.

 

Qiao, J.Y., Tan, Z.L., Guan, L.L. Tang, S.X., Zhou, C.S., Han, X.F., Wang, M. Kang, J.H., He, Z.X. (2015) Effects of hydrogen in headspace and bicarbonate in media on rumen fermentation, methane production and methanogenic population using in vitro gas production techniques. Animal Feed Science and Technology 206: 19-28. IF 1.713 Citations 1.

 

Romero-Perez, A., Okine, E.K., McGinn, S.M., Guan, L.L., Oba, M., Duval, S.M., Kindermann, M., Beauchemin, K.A. (2015) Sustained reduction in methane production from long-term addition of 3-nitrooxypropanol to a beef cattle diet. Journal Animal Science 93:1780-91. IF 2.014 Citations 15.

 

Romero-Pérez, A., Okine, E.K., Guan, L.L. Duval, S.M., Kindermann, M., Beauchemin, K.A. (2015) Effects of 3-nitrooxypropanol on methane production using the rumen simulation technique (Rusitec). Animal Feed Science and Technology 209: 98–109. IF 1.713 Citations 7.

 

Roy, B., Sedgewick, G., Aalhus, J. L., Basarab, J. A., Bruce, H. L. (2015) Modification of mature non-reducible collagen cross-link concentrations in bovine Gluteus medius and Semitendinosus muscles with steer age at slaughter, breed cross and growth promotants. Meat Science 110: 109-117. IF 2.801 Citations 2.

 

Stothard, P., Liao, X., Arantes, A.S., De Pauw, M., Coros, C., Plastow, G.S., Sargolzaei, M., Crowley, J.J., Basarab, J.A., Schenkel, F., Moore, S., Miller, S.P. (2015) A large and diverse collection of bovine genome sequences from the Canadian Cattle Genome Project. GigaScience 4: 49. IF 7.463 Citations 5.

 

Sun, H.Z., Wang, D.M., Wang, B., Wang, J.K., Liu, H.Y., Guan, L.L., Jian-Xin Liu, J.X. (2015) Metabolomics of four biofluids from dairy cows: potential biomarkers for milk production and quality. Journal of Proteome Research 14: 1287-1298. IF 4.173 Citations 8.

 

Wang, Y., Wylie, T., Stothard, P., Lin, G. (2015) Whole genome SNP genotype piecemeal imputation. BMC Bioinformatics 16: 340. IF 3.028 Citations 0.

 

Wilkinson, J.M., Gunvaldsen, R.E., Detmer, S.E., Dyck, M.K., Dixon, W.T., Foxcroft, G.R., Plastow, G.,Harding, J.C.S. (2015) Transcriptomic and epigenetic profiling of the lung of influenza-infected pigs: a comparison of different birth weight and susceptibility groups. PLoS ONE 10: e0138653. IF 3.54 Citations 0.

 

Yang, C.L., Guan, L.L., Liu, J.X., Wang, J.K. (2015) Rumen fermentation and acetogen population changes in response to an exogenous acetogen TWA4 strain and Saccharomyces cerevisiae fermentation product. Journal of Zhejiang University Science B 16: 709-19. doi:10.1631/jzus.B1500013. IF ? Citations 0.

 

Zhang C., Wang, Z., Bruce, H., Kemp, R.A., Charagu, P., Miar, Y., Yang, T., Plastow, G. (2015) Genome-wide association studies (GWAS) identify a QTL close to PRKAG3 affecting meat pH and colour in crossbred commercial pigs. BMC Genetics 16: 33-44. IF 2.152 Citations 4.