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2016

2016

Akanno, E.C, Chen, L., Abo-Ismail, M., Crowley, J., Wang, Z., Li, C., Basarab, J., MacNeil, M., Plastow, G. (2016) Genomic prediction of breed composition and heterosis effects in Angus, Charolais and Hereford crosses using 50K genotypes. Canadian Journal of Animal Science, (in press). IF 0.724. Citations 0.

 

Bertolini, F., Harding, J.C.S., Mote, B., Ladinig, A., Plastow, G.S., Rothschild, M.F. (2016) Genomic investigation of piglet resilience following porcine epidemic diarrhea outbreaks. Animal Genetics (in press). IF 1.779. Citations 0

 

Blanes, M.S., Tsoi, S.C.M., Dyck, M.K. (2016) Accurate and Phenol Free DNA Sexing of Day 30 Porcine Embryos by PCR. Journal of Visualized Experiments 108: e53301. IF 1.113 Citations 0.

 

Chauhan, A., Pathak, A., Ewida, A.Y.I., Griffiths, Z., Stothard, P. (2016) Whole genome sequence analysis of an Alachlor and Endosulfan degrading Pseudomonas strain W15Feb9B isolated from Ochlockonee River, Florida. Genomics Data 8: 134-138. IF n/a Citations 0.

 

Fleming, A.L., Hays, D.P., Moore, S., Plastow, G., Miller, S.P. (2016) History of the Hays Converter. Canadian Journal of Animal Science 96: 471–477. IF 0.724 Citations 0.

 

Flesch, T.K., Baron, V.S., Wilson, J.D., Griffith, D.W.T., Basarab, J.A., Peter J. Carlson, P.J. (2016) Agricultural gas emissions during the spring thaw: Applying a new measurement technique. Agricultural and Forest Meteorology 221: 111–121. IF 4.461 Citations 0.

 

Haisan, J., Sun, Y., Guan, L.L., Beauchemin, K.A., Iwaasa, A., Duval, Kindermann, M., Barreda, D.R., Oba, M. (2016) The effects of feeding 3-nitrooxypropanol at two doses on milk production, rumen fermentation, plasma metabolites, nutrient digestibility, and methane emissions in lactating Holstein cows. Animal Production Science 57: 282-289. IF 0.902 Citations 2.

 

Hess, A.S., Islam, Z., Hess, M.K., Rowland, R.R.R., Lunney, J.K., Doeschl-Wilson, A., Plastow, G., Dekkers. J. (2016) Comparison of host genetic factors influencing pig response to infection with two North American isolates of porcine reproductive and respiratory syndrome virus. Genetics Selection Evolution 48: 43. IF 2.895 Citations 0.

 

Kong, R.S.G., Liang, G., Chen Y., Stothard, P. Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake. BMC genomics 17: 592. IF 3.867 Citations 0.

 

Li, F., Henderson, G., Sun, X., Cox, F., Janssen, P.H., Guan, L.L. (2016) Taxonomic assessment of rumen microbiota using total RNA and targeted amplicon sequencing approaches. Frontiers in Microbiology 7:987. IF ? Citations 0.

 

Liang, G., Malmuthuge, N., Bao, H, Stothard, P., Griebel, P.J., Guan, L.L. (2016) Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves. BMC Genomics 17: 602.  IF 3.867 Citations 0.

 

Lu, D., Akanno, E.C., Crowley, J.J., Schenkel, F., Li, H., De Pauw, M., Moore, S.S., Wang, Z., Li, C., Stothard, P., Plastow, G., Miller, S.P., Basarab, J.A. (2016) Accuracy of genomic predictions for feed efficiency traits of beef cattle using 50K and imputed HD genotypes. Journal Animal Science 94: 1342-1353. IF 2.014 Citations 0.

 

Lu, Y., Vandehaar, M.J., Spurlock, D.M., Weigel, K.A., Armentano, L.E., Staples, C.R., Connor, E.E., Wang, Z., Coffey, M., Veerkamp, R. De haas Y., Tempelman, R.J. (2016) Modeling genetic and non-genetic variation of feed efficiency and its partial relationships between component traits as a function of management and environmental factors. Journal Dairy Science 100:1-16. IF 2.408 Citations 0.

 

Mahmood, S., Basarab, J., Dixon, W., Bruce, H. L. (2016) Relationship between phenotype, carcass characteristics and the incidence of dark cutting in heifers. Meat Science 121: 261-271. IF 2.801 Citations 0.

 

Mahmood, S., Basarab, J., Dixon, W., Bruce, H. L. (2016) Can potential for dark cutting be predicted by phenotype? Relationships between sex, carcass characteristics and the incidence of dark cutting beef. Canadian Journal of Animal Science 96: 19-31. IF 0.724 Citations 1.

 

Malmuthuge, N., Guan, L.L. Gut microbiome and omics: A new definition to ruminant production and health. Animal Frontiers 6: 8-12. IF ? Citations 1.

 

Manafiazar, G., Goonewardene, L., Miglior, F., Crews, D.H., Basarab, J.A., Okine E., Wang, Z. (2016) Genetic and phenotypic correlations among feed efficiency, production and selected conformation traits in dairy cows. Animal 10: 381-389. IF 1.508 Citations 0.

 

Manafiazar, G., Zimmerman, S, Basarab, J.A. (2016) Repeatability and variability of short-term spot measurement of methane and carbon dioxide emissions from beef cattle using GreenFeed Emissions Monitoring System. Canadian Journal of Animal Science 96: 143-153. IF 0.724 Citations 0.

 

Mu, C., Yang, Y., Luo, Z., Guan, L.L., Zhu, W. (2016) The Colonic Microbiome and Epithelial Transcriptome Are Altered in Rats Fed a High-Protein Diet Compared with a Normal-Protein Diet. Journal of Nutrition 146: 474-83. IF 3.74 Citations 5.

 

Nayeri, S., Sargolzaei, M., Abo-Ismail, M.K., Miller, S., Schenkel, F., Moore, S.S., Stothard, P. (2016) Genome-wide association study for lactation persistency, female fertility, longevity, and lifetime profit index traits in Holstein dairy cattle. Journal of Dairy Science 100: 1–13. IF 2.408 Citations 1.

 

Nayeri, S., Stothard, P. (2016) Tissues, Metabolic Pathways and Genes of Key Importance in Lactating Dairy Cattle. Springer Science Reviews 1-29. IF n/a Citations 0.

 

Pathak, A., Chauhan, A., Blom, J., Indest, K.J., Jung, C.M., Stothard, P., Bera, G., Green, S.J., Ogram, A. (2016) Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation. PLoS One 11(8): e0161032. IF 3.54 Citations 0.

 

Pathak, A., Chauhan, A., Ewida, A.Y.I., Stothard, P. (2016) Whole Genome Sequence Analysis of an Alachlor and Endosulfan Degrading Micrococcus sp. strain 2385 Isolated from Ochlockonee River, Florida. Journal of Genomics 4: 42. Citations 0.

 

Plastow, G.S. (2016) Genomics to benefit livestock production: improving animal health. Revista Brasileira de Zootecnia (Brazilian Journal of Animal Science) 45: 349-354. IF 0.412 Citations 0.

 

Puente, J., Samanta, S.S., Bruce, H.L. (2016) Objective meat quality characteristics associated with aged m. longissimus thoracis from the four Canadian beef quality grades. Canadian Journal of Animal Science 96: 143-153. IF 0.724 Citations 0.

 

Raszek, M.M., Guan, L.L., Plastow, G.S. (2016) Use of genomic tools to improve cattle health in the context of infectious diseases. Frontiers in Genetics 7: 30. IF n/a Citations 1.

 

Rothschild, M.F., Plastow, G. (2016) Applications of Technology for Small Holders´ Livestock to Meet Global Food Production. Ceiba 54: 3-13. IF n/a Citations 0.

 

Salehi, R., Colazo, M.G., Tsoi, S., Behrouzi, A., Tsang, B.K., Oba, M., Dyck, M.K., Ambrose, D.J. (2016) Morphologic and transcriptomic assessment of bovine embryos exposed to dietary long-chain fatty acids. Reproduction.152: 715-726. IF 3.184 Citations 0.

 

Schroyen, M., Eisley, C., Koltes, J.E., Fritz-Waters, E., Choi, I., Plastow, G., Guan, L., Stothard, P., Bao, H., Kommadath, A., Reecy, J.M., Lunney, J.K., Rowland, R.R.R., Dekkers, J.C.M., Tuggle, C.K. (2016) Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus PRRSV reveals pathway differences between pigs with alternate genotypes for a major host response QTL. BMC Genomics 17: 196. IF 3.867 Citations 2.

 

Serão, N.V.L., Kemp, R.A., Mote, B.E., Harding, J.C.S., Willson, P., Bishop, S.C. Plastow, G.S., Dekkers, J.C.M. (2016) Genetic and Genomic basis of antibody response to porcine reproductive and respiratory syndrome (PRRS) in gilts and sows. Genetics Selection Evolution 48:51. IF 2.895 Citations 1.

 

Steele, M.A., Penner, G.B., Chaucheyras-Durand, F., Guan, L.L. Development and physiology of the rumen and the lower gut: targets for improving gut health. Journal of Dairy Science 99: 4955-4966. IF 2.408 Citations 4.

 

Srithayakumar, V., Mitchell, G.B., White, B.N. (2016) Identification of amino acid variation in the prion protein associated with classical scrapie in Canadian dairy goats. BMC Veterinary Research 12: 59. IF 1.377 Citations 0.

 

Thekkoot, D.M., Kemp, R.A., Rothschild, M.F., Plastow, G.S., Dekkers, J.C.M. (2016) Estimation of genetic parameters for traits associated with reproduction, lactation, and efficiency in sows. Journal Animal Science 94: 4516-4529. IF 2.014 Citations 0.

 

Tuggle, C.K., Giuffra, E., White, S.N., Clarke, L., Zhou, H., Ross, P.J., Acloque, H., Reecy, J.M., Archibald, A., Bellone, R.R., Boichard, M., Chamberlain, A., Cheng, H., Crooijmans, R.P.M.A., Delany, M.E., Finno, C.J., Groenen, M.A.M., Hayes, B., Lunney, J.K., Petersen, J.L., Plastow, G.S., Schmidt, C.J., Song, J., Watson, M. (2016) GO-FAANG meeting: a gathering on functional annotation of animal genomes. Animal Genetics 47: 528–533. IF 1.779 Citations 0.

 

Wang, D., Liang, G, Wang, B., Sun, H., Liu, J., Guan, L.L. (2016) Systematic microRNAome profiling reveals the roles of microRNAs in milk protein metabolism and quality: insights on low-quality forage utilization. Scientific Reports 6: 21194. IF 5.228 Citations 0.

 

Wang, O., Liang, G., McAllister, T.A., Plastow, G., Stanford, K., Selinger, B., Guan, L.L. (2016) Comparative transcriptomic analysis of rectal tissue from beef steers revealed reduced host immunity in Escherichia coli O157:H7 super-shedders. PLoS ONE 11: e0151284. IF 3.54 Citations 0.

 

Wilkinson, J., Bao, H., Ladinig, A., Hong, L., Stothard, P., Lunney, J., Plastow, G., Harding, J. (2016) Genome-wide analysis of the transcriptional response to porcine reproductive and respiratory syndrome virus infection at the maternal/fetal interface and in the fetus. BMC Genomics 17: 383. IF 3.867 Citations 1.

 

Wilkinson, J.M., Ladinig, A., Bao, H., Kommadath, A., Stothard, P., Lunney, J.K., Harding, J.C.S., Plastow, G.S. (2016) Differences in whole blood gene expression associated with infection time-course and extent of fetal mortality in a reproductive model of type 2 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) infection. PLoS ONE 11(4): e0153615. IF 3.54 Citations 0.

 

Wu, D., Xu, L., Tang, S., Guan, L., He, Z., Guan, Y., Tan, Z., Han, X., Zhou, C., Kang, J., Wang, M. (2016) Influence of oleic acid on rumen fermentation and fatty acid formation in vitro. PLoS ONE 11: e0156835. IF 3.54 Citations 0.

 

Yang, T., Wilkinson, J., Wang, Z., Ladinig, A., Harding, J., Plastow, G. (2016) A genome-wide association study of fetal response to type 2 porcine reproductive and respiratory syndrome virus challenge. Scientific Reports 6: 20305. IF 5.228 Citations 2.

 

Yao, C., de los Campos, G. VandeHaar, M., Spurlock, D., Armentano, L., Coffey, M., de Haas, Y., Veerkamp, R., Staples, C.R., Connor, E.E., Wang, Z., Hanigan, M.D., Tempelman, R.J., Weigel, K. (2016) Use of genotype x environment interaction model to accommodate genetic heterogeneity for residual feed intake, dry matter intake, net energy in milk, and metabolic body weight in dairy cattle. Journal Dairy Science, (accepted on Nov 22, 2016). IF 2.408 Citations 0.

 

Zhang, C., Bruce, H., Yang, T., Charagu, P., Kemp, R.A., Boddicker, N., Miar, Y., Wang, Z., Plastow, G. (2016) Genome wide association studies (GWAS) identify QTL on SSC2 and SSC17 affecting loin peak shear force in crossbred commercial pigs. PLoS ONE 11: e0145082. IF 3.54 Citations 0.

 

Zhao, P., J. Li, H. Kang, H. Wang, Z. Fan, Z. Yin, J. Wang, Q. Zhang, Z. Wang, J.F. Liu. (2016) Structural Variant Detection by Large-scale Sequencing Reveals New Evolutionary Evidence on Breed Divergence between Chinese and European Pigs. Scientific Reports 6: 18501. IF 5.228 Citations 1.

 

Zhao, K., Liang, G., Sun, X., Guan, L.L. (2016) Comparative miRNAome analysis revealed different miRNA expression profiles in bovine sera and exosomes. BMC Genomics 201617:630. IF 3.867 Citations 0.