University of Alberta – Post-doctoral Fellow (PDF) Announcement (Beef Quantitative Genetics and Genomics)

A post-doctoral fellow (PDF) position is available at Livestock Gentec, the Department of Agricultural, Food and Nutritional Science, University of Alberta, working with a team of researchers to develop and improve genomic prediction tools on beef cattle growth, feed efficiency, carcass merit, and fertility traits and to implement genomic tools to enhance beef cattle production efficiency and quality. Researchers at Livestock Gentec have consolidated large beef cattle data sets for phenotype (n>13,000), genotype (50K, GGP100K, or HD on n>13,000), transcriptome and metabolites on a subset of the cattle, which provides excellent opportunities to elucidate genetic control of economically relevant traits and to develop genomic tools that incorporate multi-layers of “omics” data.

Major research responsibilities include: (1) Work with the existing team (principal investigators, co-investigators, research associates, PDF, research technicians, graduate students from multiple institutions including Agriculture and Agri-Food Canada and University of Alberta) to consolidate additional beef cattle multi-layer “omics” data from on-going research projects and to assist with the development and maintenance of large databases;  (2) Adapt and implement a range of methodologies for genetic/genomic analyses of beef cattle data relevant to multiple traits (growth, feed efficiency, carcass merit, and fertility traits) and multiple “omics” data; (3) Refine genetic/genomic methods to improve genomic prediction accuracy for these traits; (4)  Provide genomic profiles (genomic breed composition, molecular breeding values, and multiple trait selection indexes) for beef cattle submitted by beef producers partnering in demonstration projects; (5) Assist with mentoring of graduate students and teaching of genetic/genomic courses; (6) Conduct appropriate outreach and technology transfer in concert with other members of the research team. 

Qualifications: Applicants must have a PhD degree from a recognized university in the area of Quantitative Genetics and/or Statistical Genomics or Bioinformatics within 5 years. Familiarity with Beef Cattle Production Systems is an asset. Candidates must have a good understanding of the theoretical and computational principles related to the analyses of quantitative and molecular data for the purpose of genetic analyses and genomic prediction. Candidates must also demonstrate skills and work experience in computer programming, preferably in C, C++, ASreml, SAS, R or Perl, to develop customized programs for genetic analyses and genomic prediction. The ability to effectively communicate and collaborate with colleagues in research is essential. Previous experience working with cattle is desirable. Knowledge and experience working with large databases are a definite asset.

Applicants: For more information, or to apply, please send a cover letter, statement of research interests, updated CV, and the names of references, to either Dr. Changxi Li, changxi.li@ualberta.ca, or Dr. Graham Plastow, plastow@ualberta.ca. This is a two-year position with a great opportunity of renewal. The target start date is September 1, 2022.

Are your bulls earning their keep?

There’s the traditional way of doing things, and there’s the new (usually more effective/informative) way. Dr. Waylon Wise of Cow/Calf Health and Management Solutions (CCHMS) explains both as they relate to bull breeding soundness evaluations (BBSEs) and DNA strategies.

“A traditional herd-health relationship starts with discussing health.” says Waylon, “Once we get this streamlined, the next discussion is usually about how to use the ranch resources most effectively, improve performance, replacement selection etc. That leads to which bulls to buy, how to evaluate the success of them during breeding season, and what works best with the genetics and the environment on the ranch.”

Once pre-pubertal bulls are in the sale pen, vets like Waylon end up seeing them at the business end of a probe for semen testing to evaluate “potential competency” (note, this is NOT a measure of fertility). The goal here is to find the ones that are unfit for sale; it’s a pass or fail test. That said, passing a semen test as a 12-month old bull is like saying “if you graduate high school, you will automatically thrive in the real world.” We all know this isn’t true. Context matters. So passing isn’t the be all and end all of anything.

The main components of a BBSE (BBSE image) are the physical exam, palpation of testicles and internal sex glands, measuring scrotal circumference and evaluating the motility and structure of the sperm cells. The latter is tricky. For starters, it’s hard to perform (for the bull and the sperm) on a cold day (most bull sales are in the dead of winter); nervous bulls don’t respond well to the probe; and a variety of stressors (including being semen-tested) reduces semen quality. Not to mention that high growth rate and superior performance may delay the onset of puberty. There’s a reason why the last bull in the sale order rarely fails a semen test!

“There’s enormous unjustified pressure on these young bulls to pass a semen test,” says Waylon, “but there are too many variables to cast the results in stone. Of the physically normal pre-pubertal bulls that we pursue retesting on, 95-97% will eventually pass and be fertile.”

Large scrotal circumference in pre-pubertal bulls doesn’t mean they are more fertile, produce more calves or more weaning weight. In fact, excessive scrotal circumference (more than 40 cm) in pre-pubertal bulls may delay the onset of puberty—so it may take them longer to pass a semen test. Bulls with a smaller scrotal circumference may be just as fertile. It’s not uncommon for a young bull to gain 3, 4 or even 6 cm (!!) as he reaches puberty. If you don’t like your guy’s measurement one day, just wait a week or two.

And at the end of the day, a physically normal bull that fails a semen test or has sub-optimal scrotal circumference can sire as many calves as bulls that pass. We have the evidence. The opposite is true also. Bulls with exceptional semen quality can fail to earn their keep.

There are also welfare implications of sending 20V of electricity into the rectum to stimulate ejaculation, or injuries that occur in the chute and the unnecessary trauma to the penis by unnecessarily breaking a pre-pubertal, normally-occurring frenulum.

“We’ve already started to shift the paradigm around pre-pubertal bulls, and we need to keep educating young vets about the pitfalls of doing this so early in a bull’s life,” says Waylon. “Bulls should still be palpated, measured and evaluated in the chute prior to sale to remove the physically abnormal ones. But basically, you should be buying a bull based on his merit and what value he adds to your genetic program. The semen test of the BBSE is of minimal value.”

So there IS a better way! Use the power of DNA.

First, all potential sires must have a DNA Case Number (the animal’s universal DNA tracking number: this is the “name” of the DNA record or genotype). The majority of purebred sires will already have a genotype on file at the breed association. The vet verifies this during the BBSE and collects hair or tissue if needed. The sample barcode is scanned into Herdtrax, and the submission file is generated and sent to Neogen for processing. Once the file comes back, it’s uploaded and will automatically link the genotype to the animal’s record. This takes 4 – 6 weeks. Even if the animal is gone, you can use semen in the tank—or meat in the freezer!

To acquire parentage, the vet collects a sample from the calf (usually at branding or weaning), scans the barcode, adds the potential sires and the submission file is generated and sent to Neogen, then returned for upload. The upload will assign the sire and indicate it’s verified.

So the DNA strategies are:

• DNA all calves. Index all the bulls by number of progeny, daily service capacity, weaning weight, weaning ADG (WADG), carcass traits and total lbs produced during a breeding season.
• DNA replacements. Identify the sires who produce the calves that thrive in the current environment. These calves have been selected on data and, in some cases, produce the phenotype desired at the ranch.
• DNA Potential AI sire. Gestation can vary by +/-16 days. Keep replacements from the AI sire when clean-up bulls are used immediately after insemination.
• DNA poor calves/ dystocia. Fertility is not the only parameter. Cull bulls who dilute the gene pool with unfavourable genetics or cause undesirable outcomes.
• DNA herds. Heads-up test-breeding of groups of bulls with similar breed, pedigree or source.

Test within same herd or pasture location to evaluate:

  • Sires that work best to maximize heterosis in different herds (breed composition)
  • Sires that thrive in different pasture locations, nutrition (forestry vs native grass)
  • Sires that thrive within the terminal (low-index) vs maternal herd (high-index)

“Then repeat the trends that work,” says Waylon.

      1. Only use progeny from proven, superior bulls and cows for breeding.
      2. Use proven, superior bulls on the high-index herd to produce your own replacements. Collect semen and AI within your own herd prior to bull turnout.
      3. Send individual bulls with superior progeny performance out for the first cycle.
      4. Use sires with proven carcass traits on low-index terminal cows.
      5. Cull and replace individuals in the bottom 10%.

Yes, it’s complicated, and there needs to be an integrated approach to evaluating bulls that includes a thorough physical exam, selective semen testing of questionable or unproven pubertal bulls, and using DNA parentage to index the performance of their offspring.

“Even today, with advances in DNA technology and enhanced traceability through online and chute-side management programs such as Herdtrax, we still rely too much on a stand-alone semen test in an off-season that is not that correlated to actual fertility, performance or the bottom-line,” says Waylon. “It’s time for a change.”

 

 

 

 

 

 

At The Grill feature by William Torres. Data Management: EPDs… are they as easy as 123?

This month’s At The Grill feature by William Torres (former Research Manager at Cattleland Feedyards and popular presenter at Gentec conferences) focuses the ABCs of your EPDs, how to maximize your cattle selection without focusing on too much data to make decisions, and how to help your bottom line.

Have you ever looked at a bull sale catalogue and thought you might need a PhD to figure out what they’re trying to sell you? I mean… how much data is too much data??

At the end of the day, the people trying to sell these animals want to make the most amount of money and offer you all the most relevant information. But if you’re trying to purchase an animal, you want the opposite: the best genetics for the least amount of money.

So what it really comes down to is doing your homework and understanding your needs (much like purchasing a new car). The part most of us struggle with is EPDs and the other information that we’re not sure we really understand. So let’s recap… what is an EPD?

According to the Beef Cattle Research Council, Expected Progeny Differences (EPDs) are estimates of an animal’s genetic merit as a parent. In plain English, this how to predict the specific performance of a bull’s progeny compared to the performance of another bull’s progeny. The keywords here are PREDICT and COMPARE. EPDs for one animal are meaningless unless you compare them to the EPD of another animal.

So, if Sire A has a birth weight EPD of 4.0 and Sire B has a birth weight EPD of -2.0, then calves from Sire B might average 6 pounds lighter at birth than calves from Sire A, assuming the bulls are randomly mated in the same herd (most EPDs are designed to compare sires within a same breed). That is, until multi-breed EPDs come into the picture, like Feed Efficiency for example.

Now that we’re clear as mud, we should be able to buy the best, right? But what is the best? Let’s go back to buying a car. When I used to test bulls for feed efficiency, the question was always, “How do I sell these for the most money?” Unfortunately, there isn’t a simple answer. In any given feed efficiency test, there will be winners and losers. Think of it like an eating contest; if you and I compete against each other, only one of us can win. But the bottom line is, you need to sell ALL those bulls.

Selling is an art form. Whether you’re selling cars or bulls, you need to know the needs of the purchaser. Not everyone has the budget to buy a$100,000 bull (or car), But everyone who walked into the lot (or bull sale), is there to buy something. What are they looking for? Here are some examples:

Horsepower = Birth weight, weaning weight
Fuel efficiency = Average daily gain, conversion, feed efficiency
Longevity = sustainability

On the buyer side of the house, you need to consider your specific production goal. For example, if you sell your calves at weaning, you need to prioritize the EPDs differently than producers who retain ownership through the feedlot. A start-up cow-calf operation will most likely have different budgets and needs than a well-established outfit. Regardless of your needs, don’t be afraid to ask the seller what things really mean. Or contact John Basarab, Director of Beef Operations here at Gentec for help.

Ted Bilyea tells it like it is: Waste not, want not!

“At the global level, unless there’s a major technology change in how we produce food where we don’t need land, we’re going to have a food security problem fairly soon,” predicts Ted Bilyea, Former Executive VP of Maple Leaf Foods Inc. “It’s beginning to unfold in front of us.”

Ted breaks the issue down into the three A’s.

AVAILABILITY
Thirty years ago, about 12% of the world food was supplied by trade. That figure is now close to 25%. That’s pretty fragile. In Canada, we don’t have “availability” problems because 70% of what we consume is grown here, and we still export 50% of production. Our availability issue is that we’re the largest importer of U.S. processed-food in the world.

“Many of the US companies that had processing plants in Canada closed them up after NAFTA,” says Ted. “They no longer needed Canadian processing to sell here, and they already had marketing and distribution set up.

Push come to shove, we might not get everything here that we want to eat but we won’t starve to death either.

ACCESSIBILITY
“That’s when s**t happens,” says Ted. “Covid… closed border with the US… supply chain issues. Especially in the North. Solutions will involve better energy use so they can grow food themselves.”

And we need to do something about food waste. There are two sides to this: what happens before and after food items hit the store. On the before side, issues of rotting, storage, transport, etc. in the developing world can be taken care of with technology transfer, capital investment and political will. Far more troubling everywhere is the threat of disease. For example, China lost half of its hogs due to disease (mostly African swine fever) since 2018. That’s a quarter of all the hogs in the world. Just one single case of BSE (mad cow disease) in Alberta in December 2021 led China, Korea and the Philippines to ban imports of Canadian beef. An outbreak of avian flu in the US in 2015 led to the culling of 75 million poultry, and cost US$879 million to eradicate from production. These are not one-offs.

“On the consumer side, we should stop thinking of the contents of the green box as waste,” says Ted. “It’s an input to somebody else’s business in terms of upcycling. Even meat—because fats become biodiesel. So let’s be careful what we define as waste. It’s all energy in another form. If we’re doing things right, there’s no such thing as waste.”

But there’s a far more insidious issue on the horizon. Globally, we’re coming to the end of the era of abundance, convenience and perfection, food-wise. We’ve taken food for granted for too long. The shift is underway to an era where that may still be true occasionally, locally, depending on the product and location but we’re beginning to look at a future where scarcity is the more likely outcome.

“Productivity is the best indicator of where we’re going,” says Ted. “Supply vs demand is dropping. We don’t have the global security stocks we used to have. Why? Climate change, declining R&D investment in agriculture (Alberta’s RDAR is an exception that proves the rule) and the use of non-renewable groundwater.”

*click picture to enlarge

Eleven percent of the total agriculture trade globally depends on groundwater. In the US, 64% of groundwater is used for irrigation. Fifty percent of that comes from the Ogallala aquifer. The replenishment rate of these aquifers is way down or even zero. Think California. The Ogallala aquifer will take 6,000 years to replenish. When those global aquifers run dry—and they willl!—that 11% of trade will also dry up.

It’s not all doom and gloom. Some companies will move into Canada because they value our competitive advantages. Water is one of them. Another is the prairie grasslands.

“One of the first things I learned at Canada Packers is that you can’t move the feed to the animals,” says Ted. “Most of the world is still trying to defend against that because they want to grow their own animals so they import massive amounts of corn and barley. With the emissions footprint, it makes no sense. It never did. You need tariff barriers and subsidies when you’re not competitive. Canada’s western competitive advantage is built in. We have the grass and the feed. And companies like McDonalds and Loblaws pay a premium for the sustainable beef we grow with it.”

This is, of course, where Gentec steps in and shines. Gentec’s tools for researchers (EnVigour HX™, and the new Feeder and Replacement Heifer Profit Indexes) and projects that demonstrate the value of grazing cattle on grasslands will help producers and Western Canada maintain that competitive advantage.

AFFORDABILITY
People on low or fixed income have survived this period of abundance because food was cheap. Those days are gone. Major countries are running into issues of availability. Increases in yields are slowing dramatically. We’ve brought massive amounts of land into production. That game is over. Now we’re losing land out of production due to climate change.

“If you had to pick a place to live and farm, Western Canada is a great place,” says Ted. “I see a huge demand for meat. I just wish we had more grass on which to raise more cattle with the least GHGs of anybody in the world!”

The appealing lifestyle is all over social media. The poop isn’t!

Who’s the liar now?

We don’t often get an opportunity to compare apples to apples in terms of social media content vs reality, especially when it comes to agriculture. Producers reading the Wall Street Journal’s “Instagram Stars Make Farm Life Look Delightful – Minus the Manure” might shake their heads in disbelief. Consumers who haven’t had a chance to ever visit a farm might be left with completely the wrong idea. Contrast that with the “How Do We Make Connections” session presented at the Canadian Industry Beef Conference (CBIC 2021). Let’s just say that the two could not have been farther apart in content or theme… starting with the featured personalities.

The Wall Street Journal article starts with the “reigning Mrs. Utah and Julliard-trained ballerina” who emphasizes posts portraying a “farmcore” aesthetic (apparently, it’s a thing) of dancing in the barn in cowboy boots, carefully-organized baskets of eggs with “bonus points” if some blue ones find their way into the mix. Children, readers are warned, can “make a beautiful space not so beautiful”. Tank tops are not Prairie-child wear; and Paw Patrol sweatshirts wreck an otherwise picture-perfect scene.

The second featured farm-influencer, Parisienne Farmgirl, named for her love of Paris and all things French. Like the other influencers presented, Ms. Paris agrees that farmcore comes with an ick factor that is best left out of the photos: the pancetta is gorgeous when coated generously with herbs… What’s behind that photo? “It’s me raising that pig and the smell that goes with it” Then there’s the “amount of manure my cow makes… it’s alarming.” Neither makes it to Instagram.

On the other hand, the CBIC presentation featuring highlights of connecting two social media influencers with two real Canadian beef producers on their farms. Apryl Munro of @thiskindalife was a guest of Gordon Dibble of Dibbhurst Farms near Ingersoll, Ontario. Dibble owns a 4th generation family farm consisting of a 1,200-head feedlot operation and 650 acres of cropland used to feed the operation.

A little closer to home for Gentec, Cherie Copithorne-Barnes, CEO of CL Ranches (and new addition to the Gentec Management Advisory Board) welcomed Dina Ottoni Battistessa of @move.play.mom. Like Dibbhurst Farms, CL Ranches is a 4th generation family ranch, operating as a cow/calf, backgrounding and custom-farming operation. Dina arrived with her father and two children.

Combined, the video clips of the farm tours and the conference session provided an interesting and, at times, surprising take on how perceptions differed from reality. The guests mentioned numerous times how information in online documentaries and from friends differed so significantly from what they were seeing and hearing on the ranch. They were particularly surprised at attention and effort put into ensuring the health and welfare of the animals; the quality of the food provided to them; and the commitment of the producers to sustainable production. The latter was evidenced on both operations through their focus on clean water, soil health and nutrients, and—on Gordon’s operation—barns outfitted with geothermal heating capability, LED lighting for minimal energy usage, and natural ventilation.

And the poop—so conveniently left out of the Wall Street Journal article—comes back into the picture. Even the children were able to piece the cycle together where the grass is cycled through the cow: some goes into making beef, some comes out the other end and is used by the soil, as nature intended, to create more healthy grass to perpetuate the cycle. The producers also explained how bulk manure is collected and spread across the land to ensure a natural, sustainable farming environment.

Apryl was surprised at Gordon being younger than her; Dina, that one of the ranchers was female; and both by the fact that the food was produced in a family (not factory) setting in modern, clean, and productive systems, not Old MacDonald’s rickety, spider’s-webby Farm, and that the producers had an emotional attachment to their animals and provided them with the best care possible thus ensuring the health of their cows and the resulting food. Clearly, there is work yet to be done in informing the public.

All that said, the Wall Street Journal and the CBIC profiles did agree that, whether they experience a “farmcore” or actual “farm-life” lifestyle, these “kids see things that most kids will never see or understand”. In a lighter moment, for example, one of Dina’s children asked Cherie if the bulls were there to protect the cows. Cherie responded that they were not, and that the cows were meaner than the bulls anyway.  The camera then panned to the fireplace crackling in the corner of the room as the scene faded to black… Hopefully, Mom explained the true function of the bulls on the drive back to Calgary.

Cherie summed up the divergence between the presentations best. In terms of getting accurate information out to a wider audience, you want to highlight the best aspects of ranch life and beef production but you must also be willing to talk about the good, the bad, and the ugly … and to defend the “necessary ugly”. You have to be prepared to be honest. Additionally, many producers and producer organizations just talk about opening their farms to visitors. Cherie feels she gets the most out of her time by volunteering for organizations (such as the Calgary Stampede) where she has access to a million people to whom she could never show her farm, thus allowing her the chance to talk about beef and the science behind it.

Where is the beef….future?

by William Torres, former Research Manager at Cattleland Feedyards

 

Bloomberg reported on December 17, 2021, that Tyson, the largest US meat company has invested in a startup (Future Meat Technologies) to make cell-grown chicken and beef. This news makes me wonder where the future of our industry is headed.

From a business perspective, Tyson is looking at its long-term strategies and diversifying its portfolio. However, what message is the company sending to producers in North America?

Well, just like the automotive industry considered the implications of fuel alternatives for vehicles, packers need to consider how they’re going to meet the global demands for protein. If traditional protein can’t be sourced in some parts of the world, maybe a “hybrid” model can fill that gap.

I’ve only consumed beef alternatives probably three times in my life, only to be as disappointed (as I expected). Growing up in a household of carnivores, our definition of beef alternative was pork or chicken. What worries me is that if “we”, the traditional industry, don’t stay engaged, companies like Tyson, Memphis Meats, Future Meat, Beyond Meat, Field Roast, etc., will run their course without knowing what it takes to make cell-based alternatives a palatable choice. We don’t know if scientists have any knowledge of or background in cattle genetics, and how cross-breeding can turn a good steak into a great steak. I mean, do they understand marbling and tenderness? And how some producers work for generations selecting the right genetics to achieve that desirable carcass that packers and consumers are looking for?

Our great industry will never disappear because, let’s face it, no-one raves about how awesome a lab-grown meat-LIKE patty is; and meat consumption worldwide continues to increase along with the global population. Unless these companies can also grow bone in the lab, consumers will never have the same bone-in-rib eye experience.

So what’s the answer? Maybe we should help these companies understand that the right selection of genetics is the foundation of their future. After all, if it’s “cell-grown”, they must source those cells from real animals—animals that will continue to be selected, bred, raised, and slaughtered. In a video promoting lab meat, the host asks, “Are animals really necessary to consume protein?” Well, Yes. These proteins need starter cells that must be sourced somehow.

I mentioned staying engaged. Here are some of the opportunities I see:

• Think about whether your operation wants to be the source of these cells;
• Guide the next generation to study genetics from an alternative market view;
• Start a cell bank;
• Lobby for our right to have a say;
• Become an ambassador and help educate the public;
• Become a certified sustainable operation;
• Tell our story;
• Etc., etc.

The public consumes many alternatives to other animal products, such as soy milk, almond milk, sunflower seed butter, almond butter, soy butter, and dairy-free cheese but the original items are still around.

Cattle are an essential part of our ecosystem. How we participate in the future of our industry is in our hands. We can either fuss about it and ignore it or we can guide, advise and be at the table. As GI Joe said, “Knowing is half the battle”.

Fixing the labour crunch in agriculture

As agriculture evolves into a high-tech business, automation and machinery do a lot of the heavy lifting, giving producers and employees the ability to “operate” data and robotics to improve profitability. That means changing the perception of farm work for incoming employees, and competing with other sectors who also want them for their technical skills.

On December 9, 2021, the Agri-food Innovation Council hosted a panel-based webinar on the need to attract talent and skilled labour in the agri-food sector. Gentec attended this webinar so you don’t have to. We summarize below the panelists’ comments on the key points. The panelists were:

  • Martin Scanlon, Professor and Dean, Faculty of Agricultural and Food Sciences, University of Manitoba
  • Ryan Riese, National Director, Agriculture, Royal Bank of Canada
  • Jennifer Wright, Acting Executive Director, Operations, Programs and Partnerships, Canadian Agricultural Human Resources Council (CAHRC)

 

What key changes in innovation has the workforce brought to agriculture?

RIESE. Human ingenuity is responsible for innovation so it’s the workforce that drives innovation in the sector. When I ask clients, “What keeps you up at night?”, I get a lot about accessing labour. Not even advanced skills but appropriate skills. Sometimes, it’s just showing up reliably. So we need to drive curiosity, bring in the people who want to consider ag as a career, and the skills the industry requires. But those people need to be committed, have a good work ethic, be flexible. Ag is not a 9-to-5 job. Also they have to be ready to learn, listen and be taught.

SCANLON. Post-secondary education expects graduates to communicate clearly, think well and engage with each other professionally. They’ve been trained in crucial teamwork. Those industry needs won’t go away. But technology shapes how we deliver programs because it’s pervasive. If we look at Olds College, it has a 2-year program, Techgronomy. At UManitoba, we are taking a new approach so we don’t compete. All grads, regardless of discipline, should appreciate technology, what it can and can’t do. So all programs and courses have technology embedded in them. We partner with tech companies so that grads understand how to implement tech at the farm or other level.

WRIGHT. CAHRC does a lot of labour market research focusing on the workforce of today and in the future. Producers are experiencing labour shortages now. Our forecast says the shortage will double in next 10 years. Looking at ways to increase efficiencies and be more productive will help. That said, we also see that tech is adopted quickly but not changing the number of people required. Instead, it’s impacting the skills required. So where computer skills might have been necessary for entry-level jobs, now it’s for all jobs. We’re also hearing from producers that soft skills, teamwork, etc. are becoming more important because they are hiring people who didn’t grow up on farms. They need to teach the technology but without core background skills they won’t be successful at teaching the hands-on skills. So there’s a balance between soft skills and how they affect all elements of the workforce.

 

How well do you think public perception of working in ag aligns with reality? There’s the idyllic image of a barn with a red door and a calf peering through, munching hay. That’s changed but the public is not realizing the opportunities ag can offer.

SCANLON. We’re not doing a good job of reaching out to urban youth, and showing them the broad array of careers in ag. There’s an image issue that we have to work with at the school level. Students have to be interested in science and then see where they can do computer programming, agrology, etc. We started a program to steer undecided science grads towards food processing and agronomy. With the Faculty of Science ,we’re offering 4-6 courses that these grads can take to get insight on what an ag or food processing career is. It’s the kind of leg-up that gets them in the door for an interview. They can say: “I have gaps but here’s my science. With additional training, I’ll be useful employee”.

WRIGHT. I have first-hand experience of this. My 15-year old son wants to farm. We live in downtown Ottawa. When he shares his desires with teachers, the feedback is that he’s taking the easy way out, wanting to be a lazy farmer. I’ve had a chance to talk to those teachers but that’s not a one off. So we have a lot of work to do reaching out to urban schools, elementary and secondary, and then build on drawing undecided science grads into ag. We’ve just started two initiatives for students. One is developing business cases that require ag and non-ag students to work together, which helps build awareness of how an IT degree can be used, for example. In many cases, they’re not aware because of incorrect or old perceptions of the industry. And we’re running a wage subsidy program to connect non-ag students to ag.

RIESE. People get farther from the farm with each generation so the more opportunities they have to understand, the better. Perceptions are mostly incorrect. Industry needs to keep promoting and encouraging people to join the sector who did not grow up on the farm, and not make it a prerequisite.

Also, I want to point out that working in ag doesn’t necessarily mean you’re starting a farm or becoming an owner/operator. Those barriers are very high. That’s another conversation. But there are lots of support roles on farms as farms get bigger and more complex. They require subject matter expertise on different areas of the business. So there are lots of opportunities to join the sector without being an actual producer. We have to highlight that, too.

We see researchers going into various fields but not ag R&D. They want to build the next spaceship, but not the next farm robot. Is this an image we want to continue promoting?

SCANLON. Once people get engaged, whether they have the background or not, they are powerful advocates. We need to keep getting the message across. NASA and the Canadian Space Agency have this program: what equipment do we need for the mission to Mars? They brought in the best engineers, scientists and innovators, then added ag and food. There’s nothing old hat about ag. It’s the bedrock of society so we have to attract talent to keep it going.

RIESE. Research is the starting point but it takes many years to come to life. How great is it to wake up knowing you’re going to feed society? It’s a great story to be told. You don’t have to work for Amazon, Google, etc. There’s an incredible opportunity in ag for those looking to embark in the tech world.

WRIGHT. A lot of the tech being implemented on farms comes from outside Canada, so too does the technical help. Canadians can fill that gap.

 

Agri-food activities are conducted outside urban areas but that’s not where people live. How do we engage people to move to rural areas?

WRIGHT. I’m hearing that there’s more movement out of urban centres but it’s not translating into an increase in the labour pool because people are working remotely. They’re not connecting with the local labour force but they are increasing the need for services. So communities can ensure support for newcomers in terms of housing and services.

RIESE. We need government policy that helps bring the right people in. I hope immigration policy and ag policy are working together to kickstart the process. A lot of towns need people to work in ag.

SCANLON. It certainly is an issue. For example, Portage is an hour west of Winnipeg. It has 13,000 residents. Local companies run four buses a day from Winnipeg to ensure they have people with the right skills to ensure the continuity of their operations. Those issues aren’t going away. Then there’s the issue of bringing broadband to rural communities.

 

Automation could address labour shortages but how can you reduce labour without reducing productivity?

RIESE. Any time animal husbandry is involved, we still need physical beings to look after them. We have an obligation to the animals to ensure they are well looked-after, so we need people in that regard. Automatic feeders will help reduce that physical labour but we also need people to break down data and learning. So the roles will be different. That’s the message we want to carry.

SCANLON. Every sector is looking for people… health, IT, transportation. Are we not facing an endemic issue that won’t be solved with an ad campaign? Should we plan for ag with less people involved?

RIESE. That could be Plan B. Our goal is to attract people. If we can’t find people, it will hurt our sector or not allow us to capture opportunities. That’s unfortunate as a country. We need policy and promotion from all levels of government. Not many places in the world are better than Canada to meet the growing demand for food and protein.

SCANLON. The Barton Report identified ag as a key sector of the Canadian economy that could drive growth. That’s because we have unique endowed benefits of land mass, water, environment and climate. It would be criminal if we don’t get the talent to maximize these opportunities!

Read more about the shortage of labour in agriculture:

 

 

Kill the culls! Sex selection saves lives

Sex is big business.

Florid intro sentences aside, in agriculture, sex is a large—and largely under-reported—animal welfare issue that straddles economics as well. The numbers really aren’t good. In the UK, 95,000 male calves are culled every year. In Australia, 600,000. In Germany, 200,000. We couldn’t find numbers for Canada because the topic isn’t well researched but the few studies done record paltry neonatal care compared to females, long travel with irregular feeding times and, often, on-farm euthanasia. That’s just the dairy industry.

In Canada alone, 22.5 million male chicks are culled every year to produce our eggs. In France, that’s 50 million every year. Is pork any better? Not much. As piglets mature, they release chemicals that release a foul smell when the meat is cooked so any male pigs used for meat are killed before that happens.

But what if females could produce litters or offspring of only the desirable sex? And by the way, not only females. Sometimes, males are required, too, especially in the lab environment where this question was first raised. Enter Peter Ellis at the University of Kent, and collaborators Charlotte Douglas and James Turner at the Francis Crick Institute in the UK.

“My research focused on testes so we needed male mice,” says Peter. “I had to give the females of the litters to researchers who specifically wanted them—or cull them. That makes you aware of sex. So our goal to ensure that as few animals get culled just for being the wrong sex.”

That idea isn’t new. Sperm sorting is already used in the dairy industry but it’s not infallible and can damage the sperm. In pigs, the technique isn’t fast enough to be viable. So, basically, we can do better.

Embryo selection using CRISPR gene editing is a leaps-and-bounds improvement. For starters, it’s one-hundred-percent effective. Guaranteed. It’s also ethically more humane to cull embryos that have no nervous system and aren’t capable of suffering than live baby animals. And bonus, the resulting litters are a little larger—in mice. See here for the technical details.

Peter is quick to remind us that this research is still in the early stages. We know it works in mice. It’s bound to work in other animals but that’s yet to be tested. And at the farm level, it’s years away. In the Canadian beef industry, those coming into closest contact with the technique would be breeders.

“Once the line has been generated, it’s simply a matter of breeding,” confirms Peter. “You don’t have to gene-edit every generation, the genes required can be maintained stably in the sire and dam lines. The male carries a gene on his Y chromosome, and the female has a guide RNA that activates it. Cross them, and you get the required offspring in the next generation.”

One reason embryo selection is years away in agriculture is the public concern over genetic modification technology in the food chain.

“The UK is considering relaxing the rules around gene editing in ag,” says Peter. “That could provide important benefits, but also comes with some risks about reducing care and welfare. The Nuffield Council on Bioethics has done a lot of work around this. What level of biotech the public wants and why it’s acceptable are big questions. What we’ve done is provide a proof-of-principle to inform that debate… to take it out of the hypothetical and abstract into the real world.”

The Nuffield Report is clear that the public is suspicious of ag technology that lines producer’s pockets but more likely to be on board with it to improve animal welfare. However, the debate still has to explore acceptability behind using technology for breeding but where the end product is “normal”.

“We’re not engineering cows to produce more milk or grow faster. These animals will be the same as ones from conventional breeding practices,” says Peter. “Since milk doesn’t contain cells from the cow, that too will be normal. My sense is that public debate on gene editing will shift when people realize the welfare benefits that are possible. In the short term, that’s what our research will accomplish.”

In Canada, where GM salmon and apples are already on store shelves, public debate might reveal different answers than in the UK. Gentec researcher Ellen Goddard and her team are the national go-to experts on public acceptance and willingness-to-pay for technology-enhanced foods.

“I’d be very happy if Gentec decided to sponsor public surveying at a more granular level in Canada,” says Peter, who is a former collaborator of Gentec CEO Graham Plastow from his Ucambridge days.

Another reason for the long time horizon for embryo selection in ag is quite simply the need for more research. The research in mice represents 6-7 years of work, of which the first three alone were to develop cell lines. So the main next step—in parallel with the public debate—is developing cell lines to make sure that the parts that make the sex selection system in mice also work in other animals.

By then, we should have a better idea of whether the public, wherever they are, really wants to make a difference to animal suffering.

For more reading on this subject, try the official press release or the Francis Crick Institute website.

 

 

 

 

 

 

 

 

Animal Health Canada: A bold initiative to improve Canada’s resiliency to contagious animal diseases

“Our current approach to risk management around animal health is too fragmented and too under-invested in prevention. The economic consequences of contagion are so enormous that we can’t tolerate the status quo. We have to bring public and private interests together to prepare for and prevent disaster. Just around the corner, diseases are lurking that could slam our beef and pork exports and devastate the rural economy. The whole system requires a new frame of thinking.”

With those cautionary words, Rory McAlpine set the stage for how Animal Health Canada (AHC) would be different. Rory emphasizes that he has retired, and speaks from his position as a champion for the initial concept of AHC and his earlier work with the National Farmed Animal Health and Welfare Council, which is the secretariat supporting the creation of AHC. Two examples illustrate his thoughts.

African swine fever (ASF) killed half of pigs in China either directly or through herd culls. It has not appeared in Canada but would take just one wild boar in a remote part of the country to bring $5 billion in pork exports to a standstill—overnight! You can bet that Canada isn’t ignoring this. An ASF Executive Management Board (on which Rory sat) is building a Pan-Canadian ASF Action Plan.

“But they’re doing this off the side of their desks,” points out Rory. “If we had AHC, we’d be better prepared in terms of biosecurity standards, surveillance, traceability, border measures, and maybe even a vaccine. Even with AHC, it would be especially challenging if both wildlife and farm animals were implicated because disease management in wildlife is mostly a provincial matter.”

Chronic wasting disease (CWD) is one such feared example. It’s like mad cow disease but in deer, caribou, elk, etc., which are a food source in Indigenous communities and rural Canada. Some evidence exists that it could transmit to humans. There is no nationally-focused prevention-based strategy to handle it. See the Canadian Agri-Food Policy Institute’s report on CWD for a better idea of the imminent threat to Canadian agriculture. CWD represents an especially thorny challenge because risk management is all-encompassing, involving wildlife management, farm management, the Canadian Food Inspection Agency, veterinarians several farm sectors and indigenous communities.

“The prion protein doesn’t care about borders,” says Rory. “It doesn’t care about mandates set in legislation about who’s responsible. COVID demonstrates the need for integrated governance when managing infectious diseases. Our current approach is too based on bureaucratic convenience and siloed action plans across industry. If more actors were prepared to share their authority and resources with a group like AHC, we could better manage these risks. CFIA certainly can’t do it alone.”

Although some stakeholders are fretting about the urgency related to ASF, AHC is not operational yet. The journey has been politically challenging, with several levels of government and multiple species groups all accustomed to autonomy. The final step to occur by 2022 is a legal public-private partnership with funding.

To get this far, potential models to adopt or adapt were examined. Animal Health Australia was considered a good fit: a public-private partnership that has been funded and given legal authority to manage animal health risks and the associated financial risk. That organization has a complicated formula to manage financial risk that considers variables like whether human health is implicated and whether the source of infection is foreign.

“We can learn from Australia and others,” states Rory. “If ASF strikes tomorrow, decisions have to be made immediately about zoning, liquidating herds and financial compensation. A response fraught with lobbying and hand-wringing is not ideal, and could compound the duration and severity of the crisis.”

This type of readiness provides opportunities to drive the development of genomics tools, whether related to tracing the origin of animals (“DNA fingerprinting”) or as part of developing less susceptible populations that reduce the impact of disease. Whether we use the “Swiss cheese model” or “rings of protection”, different approaches help build resilience into a system where redundancy has been eliminated as part of just-in-time efficiencies.

But isn’t animal health just one third of the equation? Shouldn’t we be talking about One Health?

“One Health is the ultimate prize,” Rory concedes. “An integrated One Health approach to managing public health and animal health in the face of zoonotic disease risks has to start with better coordination in each camp. We have world-leading scientific capacity, digital technologies and financial resources… now we need our decision-making structures to catch up. The lives of people and animals depend on it.”

For more background on Canada’s need for Animal Health Canada, see Rory’s article in the “transition binder” the Canadian Agri-Food Policy Institute would give to the new minister for Agriculture, after the 2021 federal election.

“In that article, I use the example that it took SARS to stimulate the need to create the Public Health Agency of Canada, albeit lacking good integration with provincial public health authorities, as we see in the COVID response” says Rory. “And it took the tainted blood tragedy to fix our national blood safety system via Canadian Blood Services. We can learn from these examples in the space of animal health.”

But I’ve been using antibiotics for my animals all my life!

 

We know we should be more careful about appropriate antibiotic use for people, domestic and farm animals to avoid increasing antimicrobial resistance. But how exactly should we be more careful? And how come the solution isn’t the same for everybody? Gentec-associated researcher Ellen Goddard tackled some of the thorny questions around behaviour change at a UCalgary One Health webinar on November 17.

One Health has a very complex definition but we tend to think of it as relating to zoonotic diseases, especially diseases from wildlife. The principal drivers for the emergence of zoonoses are human activities such as agriculture, travel, trade and land use.

So almost everybody is affected by the definition but an office worker in downtown Toronto may not feel the same connection as someone who works directly with animals, be they farmed, domestic or wild. That very context colours our approach to potential solutions.

Farmers, for example, are directly involved. If you’re a farmer, you’re probably convinced that you’re behaving in the best way possible to protect your animals, the environment and the health of your family. You’ve learned and studied as much as you can from your neighbours, extension agents and vets. So if somebody shows up on your doorstep saying that you need to change your habits around antibiotics completely—and you’ve always used antibiotics successfully to protect your animals—that idea is not going to go down well. That may be because you don’t fully understand the connection between antibiotics and the development of antimicrobial resistance. Or because you don’t see that the actions you take on your one farm also affect the soil, waterways and wildlife far beyond it.

So complexity is one of the fundamental things that discourages behaviour change.

Another is that, at the end of the day, we are dealing with people, individuals and society’s approach to the use and care of animals. We all have views about animals: they are created in our youth, through cultural ties, schooling, etc.—and they almost never change. If we’re raised to believe that animals need protection and care, that applies to all animals. If we find out that they are being mistreated or subjected to actions that we interpret as mistreatment, we are likely to respond very strongly.

For example, culling animals is one of the most effective ways of limiting the spread of disease, whether to protect domestic or farm animals, wildlife or humans. As scientists, this is obvious. That’s what the data say. But if half of society has strong, fundamental, ethical beliefs about not mistreating animals and the authorities are going to cull a large number of wildlife, you can bet the reaction will be angry and hostile. This is a perfectly rational response from people who believe protecting animals is ethical. And they think they’re doing the right thing.

An example of this is the badger cull in the UK. Badgers are a protected species, so the public can’t get its head around the idea of culling them because they are bringing tuberculosis onto livestock farms. Badgers need protecting, period. That said, the public supports vaccinating the badgers (this is doable). On the other hand, farmers are desperate for protection from this disease. They want the culls. Once again, the data show that, in areas of the UK where culling has taken place, the rate of cattle infection from tuberculosis is lower. So farmers say, “See? Culling works.” Then the decision falls into political hands, and citizens feel undermined because their position, contribution and voice aren’t valued.

An example closer to home is chronic wasting disease (CWD) in cervids. Deer are far removed from most people’s lives these days, so you’d think the public would have no interest in culling decisions. The Alberta government tried that—and there was a huge pushback. People simply didn’t like the idea of killing huge numbers of deer and elk. Setting the cull aside for a moment, CWD hasn’t been shown to affect livestock or humans but we don’t know if that will change or what the long-term implications are. Farmers say they like the idea of deer and wildlife on their property. They worry that if CWD is transmissible, they would have to act to stop the deer/human/animal interaction. They like that their farms are private property, not accessible to others. It makes them feel they can control some aspects of their environment. So we have to understand what motivates people to change their behaviour when an issue of animal health may affect the public.

From our surveys, we know that everybody opposes taking NO action; but hunters, outfitters and the public differ hugely on the type of action to take. If you make your livelihood on something that will be restricted, you will feel more strongly than the said office worker in Toronto. So individual behaviour influences the success of any One Health strategy. If we don’t come up with multifaceted solutions, we will fail because, particularly in the context of animals, people have strong feelings that drive whether they accept or reject solutions.

That’s why it’s so important to do behavioural modelling to test strategies that may be successful. We need to understand what drives people’s behaviour, pick the strategies that encourage change, and tailor them to groups and individuals on the front lines. This will be essential if we’re going to apply One Health in a way that benefits the world to come.